ActivePathways

Integrative pathway enrichment analysis of multi-omics data.

ActivePathways fuses P-values from complementary omics datasets to prioritise genes and pathways, and reports which datasets support each enriched pathway. Results can be visualised as enrichment maps in Cytoscape with the EnrichmentMap app.

Please cite

Integrative pathway enrichment analysis of multivariate omics data
Marta Paczkowska^*, Jonathan Barenboim^*, Nardnisa Sintupisut, Natalie S Fox, Helen Zhu, Diala Abd-Rabbo, Miles W Mee, …, Jüri Reimand, PCAWG Consortium

Nature Communications 2020 doi code